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916a7e7933Closes: https://bugs.gentoo.org/953853 Closes: https://bugs.gentoo.org/957242 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
44 lines
1.1 KiB
Bash
44 lines
1.1 KiB
Bash
# Copyright 1999-2025 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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inherit cmake
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DESCRIPTION="Fast inference of approximately-maximum-likelihood phylogenetic trees"
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HOMEPAGE="https://morgannprice.github.io/fasttree/"
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SRC_URI="
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http://www.microbesonline.org/fasttree/FastTree-${PV}.c
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http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-${PV}.c
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http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-${PV}.tar.gz
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"
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LICENSE="GPL-2"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE="double-precision openmp cpu_flags_x86_sse3"
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REQUIRED_USE="?? ( double-precision cpu_flags_x86_sse3 )"
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DOCS=( README )
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PATCHES=( "${FILESDIR}"/${P}-format-security.patch )
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src_unpack() {
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mkdir "${S}" || die
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pushd "${S}" > /dev/null || die
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unpack ${A}
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cp "${DISTDIR}"/{FastTreeUPGMA-${PV}.c,FastTree-${PV}.c} . || die
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cp "${FILESDIR}"/CMakeLists.txt . || die
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popd > /dev/null || die
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}
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src_configure() {
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local mycmakeargs=(
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-DVERSION="${PV}"
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-DHAS_SSE3=$(usex cpu_flags_x86_sse3)
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-DUSE_OPENMP=$(usex openmp)
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-DUSE_DOUBLE=$(usex double-precision)
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)
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cmake_src_configure
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}
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