gentoo-ebuilds/sci-biology/maq/files/maq-0.7.1-gcc14-build-fix.patch
Brahmajit Das 061394aeec
sci-biology/maq: Fix assignment to incompatible pointer type
Closes: https://github.com/gentoo/gentoo/pull/36459
Closes: https://bugs.gentoo.org/921137
Signed-off-by: Brahmajit Das <brahmajit.xyz@gmail.com>
Signed-off-by: David Seifert <soap@gentoo.org>
2024-04-27 21:15:05 +02:00

23 lines
603 B
Diff

Bug: https://bugs.gentoo.org/921137
--- a/fastq2bfq.c
+++ b/fastq2bfq.c
@@ -15,7 +15,7 @@ int64_t fastq2bfq(FILE *fp_fq, const char *fn_bfq, int n_reads)
char name[256], str[1024];
int l, is_new = 0, l_prefix = 0;
bit64_t n;
- gzFile *fp = 0;
+ gzFile fp = 0;
INIT_SEQ(seq); INIT_SEQ(qual);
seq_set_block_size(256);
n = 0;
--- a/simulate.c
+++ b/simulate.c
@@ -74,7 +74,7 @@ int maq_simutrain(int argc, char *argv[])
{
fqc_t *fqc;
FILE *fp;
- gzFile *fpout;
+ gzFile fpout;
if (argc < 3) {
fprintf(stderr, "Usage: maq simutrain <simupars.dat> <known_reads.fastq>\n");
return 1;