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794061a329
bump copyright of touched ebuilds to 2024 Signed-off-by: Lucio Sauer <watermanpaint@posteo.net> Signed-off-by: Michał Górny <mgorny@gentoo.org>
44 lines
1.1 KiB
Bash
44 lines
1.1 KiB
Bash
# Copyright 1999-2024 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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inherit flag-o-matic toolchain-funcs
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DESCRIPTION="A rapid whole genome aligner"
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HOMEPAGE="http://mummer.sourceforge.net/"
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SRC_URI="https://downloads.sourceforge.net/mummer/MUMmer${PV}.tar.gz"
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S="${WORKDIR}/MUMmer${PV}"
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LICENSE="Artistic"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE="doc"
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RDEPEND="
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app-shells/tcsh
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dev-lang/perl"
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PATCHES=(
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"${FILESDIR}"/${PN}-3.23-fix-build-system.patch
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"${FILESDIR}"/${PN}-3.23-fix-c++-qa.patch
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"${FILESDIR}"/${PN}-3.23-fix-shebangs.patch
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)
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src_configure() {
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use amd64 && append-cppflags -DSIXTYFOURBITS
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tc-export AR CC CXX
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}
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src_install() {
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dobin src/kurtz/mm3src/mummer
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dobin src/tigr/{combineMUMs,delta-filter,gaps,mgaps,postnuc,postpro,prenuc,prepro,repeat-match,show-aligns,show-coords,show-tiling,show-snps,show-diff}
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dobin scripts/{exact-tandems,mapview,mummerplot,dnadiff,nucmer,promer,run-mummer1,run-mummer3,nucmer2xfig}
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newbin src/tigr/annotate mummer-annotate
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insinto /usr/share/mummer/lib
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doins scripts/Foundation.pm
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einstalldocs
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use doc && dodoc -r docs/.
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}
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