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48c3969c6b
Bug: https://bugs.gentoo.org/822408 Bug: https://bugs.gentoo.org/831489 Signed-off-by: David Seifert <soap@gentoo.org>
38 lines
921 B
Bash
38 lines
921 B
Bash
# Copyright 1999-2024 Gentoo Authors
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# Distributed under the terms of the GNU General Public License v2
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EAPI=8
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inherit flag-o-matic toolchain-funcs
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DESCRIPTION="Sequential, Parallel & Distributed Inference of Large Phylogenetic Trees"
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HOMEPAGE="https://github.com/stamatak/standard-RAxML"
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SRC_URI="https://github.com/stamatak/standard-RAxML/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz"
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S="${WORKDIR}/standard-RAxML-${PV}"
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LICENSE="GPL-2"
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SLOT="0"
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KEYWORDS="~amd64 ~x86"
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IUSE="cpu_flags_x86_sse3 +threads"
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# mpi is not supported in version 7.2.2. mpi is enabled by adding -DPARALLEL to CFLAGS
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PATCHES=( "${FILESDIR}"/${P}-makefile.patch )
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src_configure() {
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use cpu_flags_x86_sse3 &&
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append-cppflags -D__SIM_SSE3 &&
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append-cflags -msse3
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use threads &&
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append-cppflags -D_USE_PTHREADS &&
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append-cflags -pthread
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tc-export CC
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}
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src_compile() {
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emake -f Makefile.gcc
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}
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src_install() {
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dobin raxmlHPC
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}
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