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c346a2a598
it occurs only with openbabel-3.1.1_p20241221, because
openbabel has changed namespaces :
a0ec8c9655
Closes: https://bugs.gentoo.org/955047
Signed-off-by: Nicolas PARLANT <nicolas.parlant@parhuet.fr>
Part-of: https://github.com/gentoo/gentoo/pull/41831
Closes: https://github.com/gentoo/gentoo/pull/41831
Signed-off-by: Sam James <sam@gentoo.org>
37 lines
1.5 KiB
Diff
37 lines
1.5 KiB
Diff
https://github.com/hvennekate/Molsketch/pull/17.patch
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From b3ecbef4766591dea4f8349c70f14cfb67d7400b Mon Sep 17 00:00:00 2001
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From: Nicolas PARLANT <nicolas.parlant@parhuet.fr>
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Date: Mon, 28 Apr 2025 19:25:24 +0000
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Subject: [PATCH] fix namespace for obabeliface
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openbabel has changed namespaces :
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https://github.com/openbabel/openbabel/commit/a0ec8c96554d4ee4f9bf80b00165b1ce554c8621
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> Molsketch-0.8.1/obabeliface/obabeliface.cpp:199:5: error: use of undeclared identifier 'impl'; did you mean 'OpenBabel::impl'?
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> 199 | FOR_ATOMS_OF_MOL(obatom, molecule) {
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> | ^
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> /usr/include/openbabel3/openbabel/obiter.h:417:49: note: expanded from macro 'FOR_ATOMS_OF_MOL'
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> 417 | #define FOR_ATOMS_OF_MOL(a,m) for (auto a : impl::MolGetAtoms(m))
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> | ^
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> /usr/include/openbabel3/openbabel/obiter.h:401:13: note: 'OpenBabel::impl' declared here
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> 401 | namespace impl {
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> | ^
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Signed-off-by: Nicolas PARLANT <nicolas.parlant@parhuet.fr>
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---
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obabeliface/obabeliface.cpp | 1 +
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1 file changed, 1 insertion(+)
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diff --git a/obabeliface/obabeliface.cpp b/obabeliface/obabeliface.cpp
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index 029f4e3..fad553a 100644
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--- a/obabeliface/obabeliface.cpp
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+++ b/obabeliface/obabeliface.cpp
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@@ -190,6 +190,7 @@ namespace Molsketch
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// TODO should be const, but OpenBabel iterator methods do not support const
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bool hasCoordinates(OpenBabel::OBMol &molecule) {
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+ using namespace OpenBabel;
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FOR_ATOMS_OF_MOL(obatom, molecule) {
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if (obatom->GetVector() != OpenBabel::VZero)
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return true;
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